ASCL Code Record
[ascl:2406.016]
BiaPy: Bioimage analysis pipeline builder
Franco-Barranco, Daniel; Andrés-San Román, Jesús A.; Hidalgo-Cenalmor, Ivan; Backová, Lenka; González-Marfil, Aitor; Caporal, Clément; Chessel, Anatole; Gómez-Gálvez, Pedro; Escudero, Luis M.; Wei, Donglai; Muñoz-Barrutia, Arrate; Arganda-Carreras, Ignacio
BiaPy provides deep-learning workflows for a large variety of image analysis tasks, including 2D and 3D semantic segmentation, instance segmentation, object detection, image denoising, single image super-resolution, self-supervised learning and image classification. Though developed specifically for bioimages, it can be used for watershed-based instance segmentation for friends-of-friends proto-haloes.
- Code site:
- https://github.com/BiaPyX/BiaPy https://biapy.readthedocs.io/en/latest/
- Used in:
- https://ui.adsabs.harvard.edu/abs/2024A%26A...685A..37L
- Described in:
- https://ieeexplore.ieee.org/abstract/document/10230593
- Bibcode:
- 2024ascl.soft06016F
